Ginny Farías: Neuronal Organelle Dynamics

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Dr. Ginny G. Farías
Cell Biology, Faculty of Science, Utrecht University
Kruytgebouw, room N505
Padualaan 8, 3584 CH Utrecht
The Netherlands


Curriculum Vitae

Ginny G. Farías studied Biology at the P. Catholic University of Chile in Chile, where she also obtained her PhD in Cellular and Molecular Biology (2009). After her training in molecular biology of neurons and neurodegeneration with Dr. Nibaldo C. Inestrosa, she performed a postdoctoral stay with Dr. Juan S. Bonifacino at the National Institutes of health (2010-2016). Here, she used high spatio-temporal resolution imaging in conjunction with genetic engineering approaches, to study how protein and organelle distribution is achieved in neurons. In 2016, she joined the Division of Cell Biology, Department of Biology at Utrecht University. Here, she has been developing new tools and strategies to study how organelle dynamics contribute to neuronal polarity. In 2018, she has received a VIDI Grant, giving her the opportunity to start her own independent group.

Research summary

The goal of this new lab is to understand the molecular mechanisms by which organelles are organized within the neuron, and how the organelle organization and networking contributes to neuronal development and function. Organelle disorganization has been strongly involved in several neurological diseases; however, it is unknown if the altered organelle organization is the cause or just a consequence of the impaired neuronal function. By deciphering the basic molecular mechanisms underlying organelle organization and inter-communication, we can better understand how they contribute to neuronal function.

Our research line is currently focused on the endoplasmic reticulum (ER). This is one of the largest and most multifunctional organelles and consist in an interconnected network of two different shapes: ER-cisternae and ER-tubules. The ER network contacts with several organelles and the cytoskeleton. We currently investigate: i) the machineries responsible for the organization and dynamics of the segregated ER in neurons; ii) the role of local ER organization on organelle and cytoskeleton dynamics; and iii) the contribution of the ER networking to neuronal polarity.

Our model consists in the use of primary cultures of rat neurons. We use live-cell imaging of fluorescent tagged proteins in combination with photobleaching and photoactivation techniques to study organelle dynamics. By using and developing innovative genetic engineering tools called heterodimerization systems, we study how organelles locally contribute to neuronal development and function.


Lab members

Max Koppers
PhD students:  
Recruiting people.
See announcement in Positions
Nazmiye Özkan
Mai Dan Nguyen
Master students:  
Alexandra van Harten  
Inge van Soest  
Ha Nguyen  
Lauran Geertzen  
Wasim Shehata  




Farías GG*, Fréal A, Tortosa E, Stucchi R, Pan X, Portegies S, Will L, Altelaar M, Hoogenraad CC*. Feedback-driven mechanisms between microtubules and the endoplasmic reticulum instruct neuronal polarity. Neuron 2019, 102(1):184-201.


Farías GG, Guardia CM, De Pace R, Britt DJ, Bonifacino JS. BORC/Kinesin-1 ensemble drives polarized transport of lysosomes into the axon. Proc Natl Acad Sci U S A. 2017, 114(14): E2955-E2964.


Guardia CM, Farías GG, Jia R, Pu J, Bonifacino JS. BORC functions upstream of kinesins 1 and 3 to coordinate regional movement of lysosomes along different microtubule tracks. Cell Reports 2016, 17(8): 1950-1961.

Guo X*, Farías GG*, Mattera R, Bonifacino JS. Rab5 and its effector FHF contribute to neuronal polarity through dynein-dependent retrieval of somatodendritic proteins from the axon. Proc Natl Acad Sci U S A. 2016, 113(36): E 5318-5327. * Equal contribution

Farías GG, Britt DJ, Bonifacino JS. Imaging the polarized sorting of proteins from the Golgi complex in live neurons. Methods Mol Biol. 2016, 1496:13-30.

Britt DJ, Farías GG, Guardia CM, Bonifacino JS. Mechanisms of polarized organelle distribution in neurons. Front Cell Neurosci. 2016, 10:88.


Farías GG, Guardia CM, Britt DJ, Guo X, Bonifacino JS. Sorting of dendritic and axonal vesicles at the pre-axonal exclusion zone. Cell Reports 2015, 13(6): 1221-1232.

Jain S, Farías GG, Bonifacino JS. Polarized sorting of the copper transporter ATP7B in neurons mediated by recognition of a dileucine signal by AP-1. Mol Biol Cell 2015, 26(2): 218-228.


Mattera R*, Farías GG*, Mardones GA, Bonifacino JS. Co-assembly of viral envelope glycoproteins regulates their polarized sorting in neurons. PloS Pathog. 2014, 10(5): e1004107. * Equal contribution

Farías GG, Gershlick DC, Bonifacino JS. Going forward with retromer. Dev Cell. 2014, 29(1): 3-4.


Inestrosa NC, Godoy JA, Vargas JY, Arrazola MS, Rios JA, Carvajal FJ, Serrano FG, Farías GG. Nicotine prevents synaptic impairment induced by amyloid-β oligomers through α7-nicotinic acetylcholine receptor activation. Neuromolecular Med. 2013, 15(3): 549-569.

Ren X, Farías GG, Canagarajah BJ, Bonifacino JS, Hurley JH. Structural basis for recruitment and activation of the AP-1 clathrin adaptor complex by Arf1. Cell 2013, 152(4): 755-767.


Farías GG, Cuitino L, Guo X, Ren X, Jarnik M, Mattera R, Bonifacino JS. Signal-mediated, AP-1/clathrin-dependent sorting of transmembrane receptors to the somatodendritic domain of hippocampal neurons. Neuron 2012, 75(5): 810-823.

Prabhu Y, Burgos PV, Schindler C, Farías GG, Magadán JG, Bonifacino JS. Adaptor protein 2-mediated endocytosis of the β-secretase BACE1 is dispensable for amyloid precursor protein processing. Mol Biol Cell. 2012, 23(12): 2339-2351.

Varela-Nallar L, Parodi J, Farías GG, Inestrosa NC. Wnt-5a is a synaptogenic factor with neuroprotective properties against Aβ toxicity. Neurodegener Dis. 2012, 10(1-4): 23-26.



Cuitino L, Godoy JA, Farías GG, Couve A, Bonansco C, Fuenzalida M, Inestrosa NC. Wnt-5a modulates recycling of functional GABAA receptors on hippocampal neurons. J Neurosci. 2010, 30(25): 8411-8420.

Cerpa W, Farías GG, Fuenzalida M, Bonansco C, Inestrosa NC. Wnt-5a occludes Aβ oligomer-induced depression of glutamatergic transmisión in CA1 pyramidal neurons from hippocampal slices. Mol. Neurodegener. 2010, 5:3.

Farías GG, Godoy JA, Varela-Nallar L, Inestrosa NC. Wnt Signaling modulates pre- and postsynaptic maturation. Therapeutic considerations. Develop Dynamics 2010, 239(1): 94-101.


Farías GG, Alfaro IE, Grabowski CP, Godoy JA, Inestrosa NC. Wnt-5a/ JNK signaling promotes the clustering of PSD-95 in hippocampal neurons. J Biol Chem 2009, 284(23): 15857-15866.


Cerpa W, Godoy JA, Alfaro I, Farías GG, Metcalfe MJ, Fuentealba R, Bonansco C, Inestrosa NC. Wnt-7a modulates the synaptic vesicle cycle and synaptic transmission in hippocampal neurons. J Biol Chem. 2008, 283(9): 5918-5927.


Farías GG, Valles AS, Colombres M, Godoy JA, Toledo EM, Lukas RJ, Barrantes FJ, Inestrosa NC. Wnt-7a induces presynaptic colocalization of α7-nicotinic acetylcholine receptors and adenomatous polyposis coli in hippocampal neurons. J Neurosci. 2007, 27(20): 5313-5325.


Farías GG, Godoy A, Vázquez MC, Adani R, Meshulam H, Jesús Avila, Amitai G, Inestrosa NC. The anti-inflammatory and cholinesterase inhibitor bifunctional compound IBU-PO protects from β-amyloid neurotoxicity by acting on Wnt signaling components. Neurob. Dis. 2005, 18(1): 176-183.


Fuentealba RA, Farías G, Scheu J, Bronfman M, Marzolo MP, Inestrosa NC. Signal transduction during amyloid β-peptide neurotoxicity: role in Alzheimer disease. Brain Res Brain Res Rev. 2004, 47(1-3): 275-289.

Farías GG, Godoy A, Hernández F, Avila J, Fisher A, Inestrosa NC. M1 muscarinic receptor activation protects neurons from β-amyloid toxicity. A role for Wnt signaling pathway. Neurobiol. Dis. 2004, 17(2): 337-348.